CDS
| Accession Number | TCMCG057C45312 |
| gbkey | CDS |
| Protein Id | XP_018447832.1 |
| Location | join(12901753..12901947,12902418..12902460,12902610..12902699,12902797..12902872,12902943..12903012,12903152..12903301,12903383..12903487,12903593..12903739,12903843..12903918,12904075..12904163,12904250..12904341,12904641..12904683,12904785..12904841) |
| Gene | LOC108819316 |
| GeneID | 108819316 |
| Organism | Raphanus sativus |
Protein
| Length | 410aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018592330.1 |
| Definition | PREDICTED: squalene synthase 1 isoform X1 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | I |
| Description | squalene |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction |
R00702
[VIEW IN KEGG] R02872 [VIEW IN KEGG] R06223 [VIEW IN KEGG] |
| KEGG_rclass |
RC00362
[VIEW IN KEGG] RC00796 [VIEW IN KEGG] RC02839 [VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko01006 [VIEW IN KEGG] |
| KEGG_ko |
ko:K00801
[VIEW IN KEGG] |
| EC |
2.5.1.21
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00100
[VIEW IN KEGG] ko00909 [VIEW IN KEGG] ko01100 [VIEW IN KEGG] ko01110 [VIEW IN KEGG] ko01130 [VIEW IN KEGG] map00100 [VIEW IN KEGG] map00909 [VIEW IN KEGG] map01100 [VIEW IN KEGG] map01110 [VIEW IN KEGG] map01130 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGGGAGCTTGGGGACGTTGCTGAGGTATCCGGATGATGTATATCCGCTGCTGAAGATGAAACGAGCGATCGAGGAAGCGGAGAAGCAGATCCCTCCCGAGCCACACTGGGGTTTCTGCTATTCAATGCTCCACAAGGTCTCTCGTAGCTTCTCTCTCGTTATCCAGCAACTTGGTACCGATCTTCGTAACGCTGTGTGTGTGTTCTACTTGGTTCTCCGAGCTCTTGATACAGTAGAGGATGACACAAGCATACCAACTGATGAAAAGCTGCCCATCTTGATAGCGTTCCACCGTCACATCTACGATACTGACTGGCACTATTCATGTGGTACGAAGGAGTACAAGGTTCTGATGGACCAATTTCACCACGTTGCTGCAGCTTTTCTTGAACTTGAAAAAGGGTATCAAGAGGCTATCGAGGAAATTACTAAAAGAATGGGAGCAGGAATGGCCAAGTTTATTTGCCAAGAGGTAGAAACTGTTGATGACTACGATGAGTACTGCCACTATGTTGCTGGACTTGTGGGTTTAGGTCTGTCGAAACTCTTCCTAGCTTCGGGAACAGAAGCTTTGTTGCCAGATTGGGAGCGGATTTCCAATTCAATGGGTTTATTTCTTCAGAAAACAAACATTATCAGAGATTATCTTGAAGACATTAATGAAATACCAAAGTCCCGCATGTTTTGGCCTCGCAAGATTTGGGGCAAATATGCTGACAAGCTAGAGGACTTAAAATACGAGGAGAATTCAACTAAATCAGTGCATTGCTTGAATGAAATGGTCACCAATGCATTGACGCATATTGAAGATTGCCTGAAGTACATGGCTGTGTTGCGTGATCCTTCTATATTTCGGTTCTGTGCTATCCCTCAGATCATGGCGATTGGAACACTTGCATTGTGCTATAACAATGTACAAGTATTTAGAGGCGTGGTGAAACTGAGGCGAGGTCTAACTGCCAAAGTCATTGATCGCACAAAGACAATGGCTGATGTCTATGGTGCTTTCTATGATTTTTCTTGCATGCTAAAAACAAAGGTCGACAAGAACGATCCGAATGCCAGTACGACGTTAAACCGACTTGAAGCCGTTCATAAAATCTGCAGAGACACTGGAGTCCTTCATAACAGAAAATCTTATATTAATGACAAAGGACAATCTGCCAATGTCTATATTGTAATGCTTGTGATTCTACTGGCCATAGTCTTTGCATATCTCAGAGCAAACTGA |
| Protein: MGSLGTLLRYPDDVYPLLKMKRAIEEAEKQIPPEPHWGFCYSMLHKVSRSFSLVIQQLGTDLRNAVCVFYLVLRALDTVEDDTSIPTDEKLPILIAFHRHIYDTDWHYSCGTKEYKVLMDQFHHVAAAFLELEKGYQEAIEEITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFLASGTEALLPDWERISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRKIWGKYADKLEDLKYEENSTKSVHCLNEMVTNALTHIEDCLKYMAVLRDPSIFRFCAIPQIMAIGTLALCYNNVQVFRGVVKLRRGLTAKVIDRTKTMADVYGAFYDFSCMLKTKVDKNDPNASTTLNRLEAVHKICRDTGVLHNRKSYINDKGQSANVYIVMLVILLAIVFAYLRAN |